LegacyViewerImgLoaderExtWrapper.SetupImgLoaderWrapper (Fiji Javadocs 0-SNAPSHOT API)

java.lang.Object
- bdv.spimdata.legacy.LegacyViewerImgLoaderExtWrapper.SetupImgLoaderWrapper

All Implemented Interfaces:

ViewerSetupImgLoader<T,V>, BasicMultiResolutionSetupImgLoader<T>, BasicSetupImgLoader<T>, SetupImgLoader<T>

Enclosing class:

LegacyViewerImgLoaderExtWrapper<T,V extends Volatile<T>,I extends LegacyViewerImgLoader<T,V> & LegacyImgLoader<T>>
```
public class LegacyViewerImgLoaderExtWrapper.SetupImgLoaderWrapper
extends Object
implements ViewerSetupImgLoader<T,V>, SetupImgLoader<T>
```

Constructor Summary

Constructors
Modifier Constructor and Description

protected SetupImgLoaderWrapper(int setupId)

Constructors
Modifier	Constructor and Description
`protected`	`SetupImgLoaderWrapper(int setupId)`

Method Summary

All Methods Instance Methods Concrete Methods
Modifier and Type	Method and Description
`RandomAccessibleInterval<FloatType>`	`getFloatImage(int timepointId, boolean normalize, ImgLoaderHint... hints)` Get image at the specified timepoint, converted to `FloatType`.
`RandomAccessibleInterval<T>`	`getImage(int timepointId, ImgLoaderHint... hints)` Get the image at the specified timepoint.
`RandomAccessibleInterval<T>`	`getImage(int timepointId, int level, ImgLoaderHint... hints)` Get the image at the specified timepoint and resolution level.
`Dimensions`	`getImageSize(int timepointId)` Get the size of an image.
`T`	`getImageType()`
`double[][]`	`getMipmapResolutions()` Get the sub-sampling factors, indexed by resolution level and dimension.
`AffineTransform3D[]`	`getMipmapTransforms()` Get the transformation from coordinates of the sub-sampled image of a a resolution level to coordinates of the full resolution image.
`RandomAccessibleInterval<V>`	`getVolatileImage(int timepointId, int level, ImgLoaderHint... hints)`
`V`	`getVolatileImageType()`
`VoxelDimensions`	`getVoxelSize(int timepointId)` Get the voxel size of an image.
`int`	`numMipmapLevels()` Get number of resolution levels.

Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

- Constructor Detail
  - SetupImgLoaderWrapper
```
protected SetupImgLoaderWrapper(int setupId)
```
- Method Detail
  - getImage
```
public RandomAccessibleInterval<T> getImage(int timepointId,
                                            ImgLoaderHint... hints)
```
    Description copied from interface: BasicSetupImgLoader
    
    Get the image at the specified timepoint.
    The returned image has pixel type T (an instance of T may be obtained by BasicSetupImgLoader.getImageType()).
    
    Specified by:
    
    getImage in interface BasicSetupImgLoader<T>
    
    Parameters:
    
    timepointId - timepoint for which to retrieve the image.
    
    hints - optional hints regarding how to load the image.
    
    Returns:
    
    image of type T.
  - getImageType
```
public T getImageType()
```
    Specified by:
    
    getImageType in interface BasicSetupImgLoader<T>
  - getImage
```
public RandomAccessibleInterval<T> getImage(int timepointId,
                                            int level,
                                            ImgLoaderHint... hints)
```
    Description copied from interface: BasicMultiResolutionSetupImgLoader
    
    Get the image at the specified timepoint and resolution level.
    The returned image has pixel type T (an instance of T may be obtained by BasicSetupImgLoader.getImageType()).
    
    Specified by:
    
    getImage in interface BasicMultiResolutionSetupImgLoader<T>
    
    Parameters:
    
    timepointId - timepoint for which to retrieve the image.
    
    level - resolution level for which to retrieve the image.
    
    hints - optional hints regarding how to load the image.
    
    Returns:
    
    image of type T.
  - getMipmapResolutions
```
public double[][] getMipmapResolutions()
```
    Description copied from interface: BasicMultiResolutionSetupImgLoader
    
    Get the sub-sampling factors, indexed by resolution level and dimension. For example, a sub-sampling factor of 2 means the respective resolution level is scaled by 0.5 in the respective dimension.
    
    Specified by:
    
    getMipmapResolutions in interface BasicMultiResolutionSetupImgLoader<T>
    
    Returns:
    
    sub-sampling factors, indexed by resolution level and dimension.
  - getMipmapTransforms
```
public AffineTransform3D[] getMipmapTransforms()
```
    Description copied from interface: BasicMultiResolutionSetupImgLoader
    
    Get the transformation from coordinates of the sub-sampled image of a a resolution level to coordinates of the full resolution image. The array of transforms is indexed by resolution level.
    
    Specified by:
    
    getMipmapTransforms in interface BasicMultiResolutionSetupImgLoader<T>
    
    Returns:
    
    array with one transformation for each mipmap level.
  - numMipmapLevels
```
public int numMipmapLevels()
```
    Description copied from interface: BasicMultiResolutionSetupImgLoader
    
    Get number of resolution levels.
    
    Specified by:
    
    numMipmapLevels in interface BasicMultiResolutionSetupImgLoader<T>
    
    Returns:
    
    number of resolution levels.
  - getVolatileImage
```
public RandomAccessibleInterval<V> getVolatileImage(int timepointId,
                                                    int level,
                                                    ImgLoaderHint... hints)
```
    Specified by:
    
    getVolatileImage in interface ViewerSetupImgLoader<T,V extends Volatile<T>>
  - getVolatileImageType
```
public V getVolatileImageType()
```
    Specified by:
    
    getVolatileImageType in interface ViewerSetupImgLoader<T,V extends Volatile<T>>
  - getFloatImage
```
public RandomAccessibleInterval<FloatType> getFloatImage(int timepointId,
                                                         boolean normalize,
                                                         ImgLoaderHint... hints)
```
    Description copied from interface: SetupImgLoader
    
    Get image at the specified timepoint, converted to FloatType. If requested, the image is normalized to the range [0,1].
    
    Specified by:
    
    getFloatImage in interface SetupImgLoader<T>
    
    Parameters:
    
    timepointId - timepoint for which to retrieve the image.
    
    normalize - whether the image should be normalized to [0,1].
    
    hints - optional hints regarding how to load the image.
    
    Returns:
    
    FloatType image
  - getImageSize
```
public Dimensions getImageSize(int timepointId)
```
    Description copied from interface: SetupImgLoader
    
    Get the size of an image. If possible, load only the meta-data for the specified image. Note, that this should not get the meta-data from the SequenceDescription but pull it from the image file.
    
    Specified by:
    
    getImageSize in interface SetupImgLoader<T>
    
    Parameters:
    
    timepointId - timepoint for which to retrieve the image size.
    
    Returns:
    
    the image size, or null if it could not be determined.
  - getVoxelSize
```
public VoxelDimensions getVoxelSize(int timepointId)
```
    Description copied from interface: SetupImgLoader
    
    Get the voxel size of an image. If possible, load only the meta-data for the specified image. Note, that this should not get the meta-data from the SequenceDescription but pull it from the image file.
    
    Specified by:
    
    getVoxelSize in interface SetupImgLoader<T>
    
    Parameters:
    
    timepointId - timepoint for which to retrieve the voxel size.
    
    Returns:
    
    the voxel size, or null if it could not be determined.

Class LegacyViewerImgLoaderExtWrapper.SetupImgLoaderWrapper

Constructor Summary

Method Summary

Methods inherited from class java.lang.Object

Constructor Detail

SetupImgLoaderWrapper

Method Detail

getImage

getImageType

getImage

getMipmapResolutions

getMipmapTransforms

numMipmapLevels

getVolatileImage

getVolatileImageType

getFloatImage

getImageSize

getVoxelSize