SparseLAPTracker (Fiji Javadocs 0-SNAPSHOT API)

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java.lang.Object
- net.imglib2.algorithm.MultiThreadedAlgorithm
- - net.imglib2.algorithm.MultiThreadedBenchmarkAlgorithm
  - - fiji.plugin.trackmate.tracking.sparselap.SparseLAPTracker

All Implemented Interfaces:

SpotTracker, Algorithm, Benchmark, MultiThreaded, OutputAlgorithm<org.jgrapht.graph.SimpleWeightedGraph<Spot,org.jgrapht.graph.DefaultWeightedEdge>>, Cancelable
```
public class SparseLAPTracker
extends MultiThreadedBenchmarkAlgorithm
implements SpotTracker, Cancelable
```

Field Summary
- Fields inherited from class net.imglib2.algorithm.MultiThreadedBenchmarkAlgorithm
  processingTime
- Fields inherited from class net.imglib2.algorithm.MultiThreadedAlgorithm
  errorMessage, numThreads

Constructor Summary

Constructors
Constructor and Description

SparseLAPTracker(SpotCollection spots, Map<String,Object> settings)

Method Summary

All Methods Instance Methods Concrete Methods
Modifier and Type	Method and Description
`void`	`cancel(String reason)`
`boolean`	`checkInput()`
`String`	`getCancelReason()`
`org.jgrapht.graph.SimpleWeightedGraph<Spot,org.jgrapht.graph.DefaultWeightedEdge>`	`getResult()`
`boolean`	`isCanceled()`
`boolean`	`process()`
`void`	`setLogger(Logger logger)` Sets the `Logger` instance that will receive messages from this `SpotTracker`.

Methods inherited from class net.imglib2.algorithm.MultiThreadedBenchmarkAlgorithm
getProcessingTime

Methods inherited from class net.imglib2.algorithm.MultiThreadedAlgorithm
getErrorMessage, getNumThreads, setNumThreads, setNumThreads

Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface net.imglib2.algorithm.Algorithm
getErrorMessage

Methods inherited from interface net.imglib2.algorithm.MultiThreaded
getNumThreads, setNumThreads, setNumThreads

- Constructor Detail
  - SparseLAPTracker
```
public SparseLAPTracker(SpotCollection spots,
                        Map<String,Object> settings)
```
- Method Detail
  - getResult
```
public org.jgrapht.graph.SimpleWeightedGraph<Spot,org.jgrapht.graph.DefaultWeightedEdge> getResult()
```
    Specified by:
    
    getResult in interface OutputAlgorithm<org.jgrapht.graph.SimpleWeightedGraph<Spot,org.jgrapht.graph.DefaultWeightedEdge>>
  - checkInput
```
public boolean checkInput()
```
    Specified by:
    
    checkInput in interface Algorithm
  - process
```
public boolean process()
```
    Specified by:
    
    process in interface Algorithm
  - setLogger
```
public void setLogger(Logger logger)
```
    Description copied from interface: SpotTracker
    
    Sets the Logger instance that will receive messages from this SpotTracker.
    
    Specified by:
    
    setLogger in interface SpotTracker
    
    Parameters:
    
    logger - the logger to echo messages to.
  - isCanceled
```
public boolean isCanceled()
```
    Specified by:
    
    isCanceled in interface Cancelable
  - cancel
```
public void cancel(String reason)
```
    Specified by:
    
    cancel in interface Cancelable
  - getCancelReason
```
public String getCancelReason()
```
    Specified by:
    
    getCancelReason in interface Cancelable

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