ImageJ3DViewer (Fiji Javadocs 0-SNAPSHOT API)

java.lang.Object
- ij3d.ImageJ3DViewer

All Implemented Interfaces:: ij.plugin.PlugIn

public class ImageJ3DViewer
extends Object
implements ij.plugin.PlugIn

Constructor Summary

Constructors
Constructor and Description

ImageJ3DViewer()

Constructors
Constructor and Description
`ImageJ3DViewer()`

Method Summary

All Methods Static Methods Instance Methods Concrete Methods
Modifier and Type	Method and Description
`static void`	`add(String image, String c, String name, String th, String r, String g, String b, String resamplingF, String type)`
`static void`	`addBox(String name, String lowerCorner, String upperCorner)` Add a box into the current 3D universe
`static void`	`addCone(String name, String from, String to, String radius)` Add a cone into the current 3D universe
`static void`	`addOrthoslice(String image, String c, String name, String r, String g, String b, String resamplingF)`
`static void`	`addSphere(String name, String center, String radius)` Add a sphere into the current 3D universe
`static void`	`addTubePoint(String point)` Add a point to the list that will conform a tube into the current 3D universe
`static void`	`addVolume(String image, String c, String name, String r, String g, String b, String resamplingF)`
`static void`	`applyTransform(String transform)`
`static void`	`close()`
`static void`	`delete()`
`static void`	`exportContent(String format, String path)`
`static void`	`exportTransformed()`
`static void`	`fillSelection()`
`static void`	`finishTube(String name, String radius, String point)` Add a tube into the current 3D universe
`static void`	`importContent(String path)`
`static void`	`lock()`
`static void`	`main(String[] args)`
`static void`	`record360()`
`static void`	`resetTransform()`
`static void`	`resetView()`
`void`	`run(String arg)`
`static void`	`saveTransform(String transform, String path)`
`static void`	`select(String name)`
`static void`	`setChannels(String red, String green, String blue)`
`static void`	`setColor(String red, String green, String blue)`
`static void`	`setCoordinateSystem(String s)`
`static void`	`setSlices(String x, String y, String z)`
`static void`	`setThreshold(String s)`
`static void`	`setTransform(String transform)`
`static void`	`setTransparency(String t)`
`static void`	`showContent(String name, String b)`
`static void`	`snapshot(String w, String h)`
`static void`	`startAnimate()`
`static void`	`startFreehandRecording()`
`static void`	`stopAnimate()`
`static void`	`stopFreehandRecording()`
`static void`	`unlock()`

Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail
- ImageJ3DViewer
```
public ImageJ3DViewer()
```

Method Detail

main

public static void main(String[] args)

run
```
public void run(String arg)
```
Specified by:

run in interface ij.plugin.PlugIn

resetView
```
public static void resetView()
```

startAnimate
```
public static void startAnimate()
```

stopAnimate
```
public static void stopAnimate()
```

record360
```
public static void record360()
```

startFreehandRecording

public static void startFreehandRecording()

stopFreehandRecording

public static void stopFreehandRecording()

close
```
public static void close()
```

select

public static void select(String name)

showContent

public static void showContent(String name,
                               String b)

add

public static void add(String image,
                       String c,
                       String name,
                       String th,
                       String r,
                       String g,
                       String b,
                       String resamplingF,
                       String type)

addVolume

public static void addVolume(String image,
                             String c,
                             String name,
                             String r,
                             String g,
                             String b,
                             String resamplingF)

addOrthoslice

public static void addOrthoslice(String image,
                                 String c,
                                 String name,
                                 String r,
                                 String g,
                                 String b,
                                 String resamplingF)

addSphere
```
public static void addSphere(String name,
                             String center,
                             String radius)
```
Add a sphere into the current 3D universe

Parameters:

name - content name for the sphere

center - string containing the center coordinates (Ex: "0,2.3,8.4")

radius - string containing the radius of the sphere

addBox
```
public static void addBox(String name,
                          String lowerCorner,
                          String upperCorner)
```
Add a box into the current 3D universe

Parameters:

name - content name for the box

lowerCorner - string containing the lower corner coordinates (Ex: "0,2.3,8.4")

upperCorner - string containing the upper corner coordinates (Ex: "10,12.3,18.4")

addCone
```
public static void addCone(String name,
                           String from,
                           String to,
                           String radius)
```
Add a cone into the current 3D universe

Parameters:

name - content name for the cone

from - string containing the initial coordinates (Ex: "0,2.3,8.4")

to - string containing the end coordinates (Ex: "10,12.3,18.4")

radius - string containing the radius of the cone

addTubePoint
```
public static void addTubePoint(String point)
```
Add a point to the list that will conform a tube into the current 3D universe

Parameters:

point - string containing tube point coordinates

finishTube
```
public static void finishTube(String name,
                              String radius,
                              String point)
```
Add a tube into the current 3D universe

Parameters:

name - content name for the tube

radius - string containing the radius of the tube

point - string containing the coordinates of the last point to add to the tube

delete
```
public static void delete()
```

snapshot

public static void snapshot(String w,
                            String h)

setSlices

public static void setSlices(String x,
                             String y,
                             String z)

fillSelection
```
public static void fillSelection()
```

lock
```
public static void lock()
```

unlock
```
public static void unlock()
```

setChannels

public static void setChannels(String red,
                               String green,
                               String blue)

setColor

public static void setColor(String red,
                            String green,
                            String blue)

setTransparency

public static void setTransparency(String t)

setCoordinateSystem

public static void setCoordinateSystem(String s)

setThreshold

public static void setThreshold(String s)

applyTransform

public static void applyTransform(String transform)

resetTransform
```
public static void resetTransform()
```

saveTransform

public static void saveTransform(String transform,
                                 String path)

setTransform

public static void setTransform(String transform)

importContent

public static void importContent(String path)

exportTransformed

public static void exportTransformed()

exportContent

public static void exportContent(String format,
                                 String path)

Class ImageJ3DViewer

Constructor Summary

Method Summary

Methods inherited from class java.lang.Object

Constructor Detail

ImageJ3DViewer

Method Detail

main

run

resetView

startAnimate

stopAnimate

record360

startFreehandRecording

stopFreehandRecording

close

select

showContent

add

addVolume

addOrthoslice

addSphere

addBox

addCone

addTubePoint

finishTube

delete

snapshot

setSlices

fillSelection

lock

unlock

setChannels

setColor

setTransparency

setCoordinateSystem

setThreshold

applyTransform

resetTransform

saveTransform

setTransform

importContent

exportTransformed

exportContent