public class GeodesicDistanceMap3DPlugin extends Object implements ij.plugin.PlugIn
Constructor and Description |
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GeodesicDistanceMap3DPlugin() |
Modifier and Type | Method and Description |
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ij.ImagePlus |
process(ij.ImagePlus markerPlus,
ij.ImagePlus maskPlus,
String newName,
ChamferMask3D chamferMask,
boolean normalize)
Computes the distance propagated from the boundary of the white
particles, within the white phase.
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ij.ImagePlus |
process(ij.ImagePlus markerPlus,
ij.ImagePlus maskPlus,
String newName,
float[] weights,
boolean normalize)
Deprecated.
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ij.ImageStack |
process(ij.ImageStack marker,
ij.ImageStack mask,
ChamferMask3D chamferMask,
boolean normalize)
Computes the distance within the mask, starting from the marker image.
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ij.ImageStack |
process(ij.ImageStack marker,
ij.ImageStack mask,
float[] weights,
boolean normalize)
Deprecated.
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void |
run(String arg0) |
public void run(String arg0)
run
in interface ij.plugin.PlugIn
public ij.ImagePlus process(ij.ImagePlus markerPlus, ij.ImagePlus maskPlus, String newName, ChamferMask3D chamferMask, boolean normalize)
markerPlus
- the binary marker image from which distances will be
propagatedmaskPlus
- the binary mask image that will constrain the propagationnewName
- the name of the result imagechamferMask
- the set of chamfer weights for computing distancesnormalize
- specifies whether the resulting distance map should be
normalized@Deprecated public ij.ImagePlus process(ij.ImagePlus markerPlus, ij.ImagePlus maskPlus, String newName, float[] weights, boolean normalize)
markerPlus
- the binary marker image from which distances will be
propagatedmaskPlus
- the binary mask image that will constrain the propagationnewName
- the name of the result imageweights
- the set of chamfer weights for computing distancesnormalize
- specifies whether the resulting distance map should be
normalized@Deprecated public ij.ImageStack process(ij.ImageStack marker, ij.ImageStack mask, float[] weights, boolean normalize)
marker
- the binary marker image from which distances will be
propagatedmask
- the binary mask image that will constrain the propagationweights
- the set of chamfer weights for computing distancesnormalize
- specifies whether the resulting distance map should be
normalizedpublic ij.ImageStack process(ij.ImageStack marker, ij.ImageStack mask, ChamferMask3D chamferMask, boolean normalize)
marker
- the binary marker image from which distances will be
propagatedmask
- the binary mask image that will constrain the propagationchamferMask
- the chamfer mask used for computing distancesnormalize
- specifies whether the resulting distance map should be
normalizedCopyright © 2014–2023 INRA-IJPB Modeling and Digital Imaging lab. All rights reserved.