Skip navigation links

mitobo 1.8.3 API

Packages 
Package Description
cmdTools.cellAnalysis  
cmdTools.mtb_imagetools  
cmdTools.tracking.multitarget  
cmdTools.visualization  
de.unihalle.informatik.Alida.admin.annotations  
de.unihalle.informatik.MiToBo.apps.actinAnalysis
Provides tools and applications for quantifying actin filament structures in microscopy images of cells.
de.unihalle.informatik.MiToBo.apps.cells2D  
de.unihalle.informatik.MiToBo.apps.cytoplasm2D  
de.unihalle.informatik.MiToBo.apps.datatypes.cellImages  
de.unihalle.informatik.MiToBo.apps.neurites2D  
de.unihalle.informatik.MiToBo.apps.neurons2D  
de.unihalle.informatik.MiToBo.apps.nuclei2D  
de.unihalle.informatik.MiToBo.apps.particles2D  
de.unihalle.informatik.MiToBo.apps.scratchAssay  
de.unihalle.informatik.MiToBo.apps.singleCellTracking2D  
de.unihalle.informatik.MiToBo.apps.xylem  
de.unihalle.informatik.MiToBo.clustering  
de.unihalle.informatik.MiToBo.color.conversion  
de.unihalle.informatik.MiToBo.core.batch.provider.input.swing  
de.unihalle.informatik.MiToBo.core.batch.provider.output.swing  
de.unihalle.informatik.MiToBo.core.dataconverter  
de.unihalle.informatik.MiToBo.core.dataio.provider.cmdline  
de.unihalle.informatik.MiToBo.core.dataio.provider.swing  
de.unihalle.informatik.MiToBo.core.dataio.provider.swing.components  
de.unihalle.informatik.MiToBo.core.dataio.provider.xmlbeans  
de.unihalle.informatik.MiToBo.core.datatypes
Provides basic datatypes for MiToBo.
de.unihalle.informatik.MiToBo.core.datatypes.defines  
de.unihalle.informatik.MiToBo.core.datatypes.images
Contains MiToBo image data types.
de.unihalle.informatik.MiToBo.core.datatypes.interfaces  
de.unihalle.informatik.MiToBo.core.datatypes.neurites  
de.unihalle.informatik.MiToBo.core.datatypes.wrapper
Provides wrapper for for input and output datatypes for MiToBo operators.
de.unihalle.informatik.MiToBo.core.exceptions
Defines MiToBo exceptions.
de.unihalle.informatik.MiToBo.core.grappa  
de.unihalle.informatik.MiToBo.core.gui  
de.unihalle.informatik.MiToBo.core.helpers  
de.unihalle.informatik.MiToBo.core.imageJ
Provides convenience classes for interaction with ImageJ system.
de.unihalle.informatik.MiToBo.core.operator
Provides basis classes for MiToBo operator concept.
de.unihalle.informatik.MiToBo.enhance
Provides classes for image preprocessing and improvement (no filters!).
de.unihalle.informatik.MiToBo.features
Provides operators for calculating features from given images, e.g., statistical indicators or texture measures.
de.unihalle.informatik.MiToBo.features.contours  
de.unihalle.informatik.MiToBo.features.regions  
de.unihalle.informatik.MiToBo.features.statistical
Provides operators for calculating statistical image features, e.g., average intensities or variances, or moments of the intensity distribution.
de.unihalle.informatik.MiToBo.features.texture
Provides operators for calculating texture features from given images, e.g., Haralick measures.
de.unihalle.informatik.MiToBo.fields
Provides classes for calculating gradient vector flow fields, image gradient fields, potential fields and other possible fields from different data sources.
de.unihalle.informatik.MiToBo.filters.linear
Provides classes implementing linear systems.
de.unihalle.informatik.MiToBo.filters.linear.anisotropic  
de.unihalle.informatik.MiToBo.filters.nonlinear
Provides classes implementing nonlinear image filters.
de.unihalle.informatik.MiToBo.filters.vesselness
Provides various operators for enhancing vessel-like structures in images.
de.unihalle.informatik.MiToBo.gui  
de.unihalle.informatik.MiToBo.io.dirs
Provides classes for dealing with directories.
de.unihalle.informatik.MiToBo.io.files
Provides classes for handling (non-)image files.
de.unihalle.informatik.MiToBo.io.images
Provides classes for handling image files.
de.unihalle.informatik.MiToBo.io.tools
Contains helper classes for image I/O.
de.unihalle.informatik.MiToBo.math
Provides mathematical functionality.
de.unihalle.informatik.MiToBo.math.arrays.filter  
de.unihalle.informatik.MiToBo.math.distributions.impl  
de.unihalle.informatik.MiToBo.math.distributions.interfaces  
de.unihalle.informatik.MiToBo.math.fitting  
de.unihalle.informatik.MiToBo.math.images
Provides mathematical operations on images.
de.unihalle.informatik.MiToBo.math.optimization  
de.unihalle.informatik.MiToBo.math.statistics
This package contains oeprators for performing statistical analysis of data sets.
de.unihalle.informatik.MiToBo.morphology
Provides classes for morphological processing of binary images.
de.unihalle.informatik.MiToBo.segmentation.activecontours.datatypes  
de.unihalle.informatik.MiToBo.segmentation.activecontours.energies  
de.unihalle.informatik.MiToBo.segmentation.activecontours.exceptions  
de.unihalle.informatik.MiToBo.segmentation.basics  
de.unihalle.informatik.MiToBo.segmentation.contours.extraction
Provides classes for performing contour extractions from regions or other image elements.
de.unihalle.informatik.MiToBo.segmentation.evaluation  
de.unihalle.informatik.MiToBo.segmentation.evaluation.measures  
de.unihalle.informatik.MiToBo.segmentation.helpers  
de.unihalle.informatik.MiToBo.segmentation.levelset.core  
de.unihalle.informatik.MiToBo.segmentation.levelset.core.energies.derivable  
de.unihalle.informatik.MiToBo.segmentation.levelset.nonPDE  
de.unihalle.informatik.MiToBo.segmentation.levelset.PDE.datatypes  
de.unihalle.informatik.MiToBo.segmentation.levelset.PDE.solver  
de.unihalle.informatik.MiToBo.segmentation.regions.convert  
de.unihalle.informatik.MiToBo.segmentation.regions.filling
Provides operators for filling wholes in binary 2D/3D regions.
de.unihalle.informatik.MiToBo.segmentation.regions.labeling
Provides classes to perform region labeling to find connected components in binarized images.
de.unihalle.informatik.MiToBo.segmentation.regions.mser  
de.unihalle.informatik.MiToBo.segmentation.snakes.datatypes
Provides basic datatypes for MiToBo explicit active contours (snakes).
de.unihalle.informatik.MiToBo.segmentation.snakes.energies
Provides classes with energies to be used with MiToBo snakes.
de.unihalle.informatik.MiToBo.segmentation.snakes.energies.paramAdapt
Provides classes with parameter adaptation for energies to be used with MiToBo snakes.
de.unihalle.informatik.MiToBo.segmentation.snakes.optimize
Provides classes for performing snake-based segmentation on images.
de.unihalle.informatik.MiToBo.segmentation.snakes.optimize.stepsize
Provides classes for calculating several update strategies of the snake step size gamma.
de.unihalle.informatik.MiToBo.segmentation.snakes.optimize.termination
Provides classes for calculating several termination strategies of the snake optimization.
de.unihalle.informatik.MiToBo.segmentation.thresholds
Provides classes for thresholding grayscale and color images.
de.unihalle.informatik.MiToBo.tools  
de.unihalle.informatik.MiToBo.tools.image  
de.unihalle.informatik.MiToBo.tools.strings  
de.unihalle.informatik.MiToBo.tools.system  
de.unihalle.informatik.MiToBo.topology  
de.unihalle.informatik.MiToBo.tracking.multitarget.algo  
de.unihalle.informatik.MiToBo.tracking.multitarget.datatools  
de.unihalle.informatik.MiToBo.tracking.multitarget.datatypes.abstracts  
de.unihalle.informatik.MiToBo.tracking.multitarget.datatypes.impl  
de.unihalle.informatik.MiToBo.tracking.multitarget.datatypes.interfaces  
de.unihalle.informatik.MiToBo.tracking.multitarget.distributions.abstracts  
de.unihalle.informatik.MiToBo.tracking.multitarget.distributions.impl  
de.unihalle.informatik.MiToBo.tracking.multitarget.eval  
de.unihalle.informatik.MiToBo.transforms  
de.unihalle.informatik.MiToBo.visualization.colormappings  
de.unihalle.informatik.MiToBo.visualization.drawing
Provides operators to visualize data types.
de.unihalle.informatik.MiToBo.visualization.plots  
Skip navigation links

Copyright © 2010–2016 Martin Luther University Halle-Wittenberg. All rights reserved.