Package | Description |
---|---|
de.unihalle.informatik.Alida.dataconverter | |
de.unihalle.informatik.Alida.demo |
Demonstrator package of how to implement and use Alida operators.
|
de.unihalle.informatik.Alida.operator |
Contains the core of Alida, i.e. the operator concept and processing graph stuff.
|
de.unihalle.informatik.Alida.tools |
Tools for generic operator execution.
|
de.unihalle.informatik.Alida.workflows |
Classes related to workflows in Alida.
|
Modifier and Type | Class and Description |
---|---|
class |
ALDNumberConverter
Converts numbers.
|
class |
ALDVectorNativeArrayConverter
Converts 1D arrays of native data types to
Vector data types. |
Modifier and Type | Class and Description |
---|---|
class |
ALDArrayMean
Operator returning the mean value of an 1D array.
|
class |
ALDArrayMin
Operator returning the minimum value of an 1D array.
|
class |
ALDArraySum
Operator returning the sum of an 1D array.
|
class |
ALDCalcMeanArray
Operator for calculating the mean of given double values.
|
class |
ALDDemoOpControllable
Controllable demo operator for testing interaction.
|
class |
ALDDemoOpControllableHandle
Controllable demo operator for testing interaction using the status handle.
|
class |
ALDDynamicOp
Operator to test dynamic parameters and callback function.
|
class |
ALDDynamicOpExtended
Operator to test dynamic parameters and callback function.
|
class |
ALDParameterTester
Dummy operator class for demo and testing of input parameter types.
|
class |
ALDSummarizeArrayOp
A abstract summarizing operator taking a 1D array as input and
return a summarizing scalar.
|
class |
ALDTransposeMatrix
Operator for transposing matrices.
|
class |
ApplyToMatrix
Demo operator to apply a summarizing operation to a 2D array in row or column wise fashion.
|
class |
CorrectForBaseline1D
Operator to correct the extrema with respect to a baseline.
|
class |
DemoWorkflow1D
Operator implementing a workflow using
ExperimentalData1D . |
class |
DetectBaseline1D
Operator to detect a baseline in the data of an ExperimentalData1D.
|
class |
DetectLocalExtrema1D
Operator to detect local extrema in the data of an
ExperimentalData1D . |
class |
MatrixSum
Demo operator to calculate colum or row sums of a 2D array.
|
class |
ReadExperimentalData1D
Operator to read
ExperimentalData1D from a file. |
class |
RefineLocalExtrema1D
Refine extrema
extremaSmoothedData found in smoothed data
using extrema extrema of the un-smoothed. |
class |
SmoothData1D
Operator to smooth the data of an
ExperimentalData1D . |
class |
WriteExperimentalData1D
Operator to write
ExperimentalData1D to a file. |
class |
WriteExtrema1D
Operator to write
ExtremaalData1D to a file. |
Modifier and Type | Class and Description |
---|---|
class |
ALDOperator
This is the abstract super class for all Alida operators.
|
class |
ALDOperatorCollectionElement
Base class for operator classes managed by
ALDOperatorCollection . |
class |
ALDOperatorControllable
Operator class with inherent event handling for execution control.
|
(package private) class |
ALDToplevelOperator
This class is just a dummy opNode acting as the first opNode with
the stack of active opNodes of each thread.
|
Modifier and Type | Method and Description |
---|---|
void |
ALDOperator.addOperatorExecutionProgressEventListener(ALDOperatorExecutionProgressEventListener listener)
Adds a listener to this reporter.
|
void |
ALDOperator.removeOperatorExecutionProgressEventListener(ALDOperatorExecutionProgressEventListener listener)
Removes a listener from this reporter.
|
Modifier and Type | Class and Description |
---|---|
class |
ALDOpRunner
Generic commandline interface to run an Alida operator.
|
Modifier and Type | Class and Description |
---|---|
class |
ALDWorkflow
Class to model a workflow in Alida.
|
Copyright © 2010–2021 Martin Luther University Halle-Wittenberg, Institute of Computer Science, Pattern Recognition and Bioinformatics. All rights reserved.